rmcgibbo/pyhmc — pull request #2 by rmcgibbo (2014-12-21 10:47:43+00:00)
Title: [WIP] AR(p) correlation time estimator

Integrated autocorrelation time estimator using AR(p), tested against CODA's `effectiveSize`.

Still needs:
- [ ] proper API / docstrings
- [ ] support for multidimensional input data (many 1D AR(p), not VAR).

cc: https://github.com/choderalab/pymbar/issues/131