broadinstitute/picard — pull request #140 by yfarjoun (2014-12-19 16:21:19+00:00)
Title: - Refactoring CollectWgsMetrics in order to be able to easily create

CollectRawWGSMetrics.
- Create RawWGSMetrics by overriding some default option values and
repackaging the metrics class.
- Moved CollectIlluminaSummaryMetrics (will be deleted eventually)
- Fixed some test files. (unused)
- Removed the buggy CLP CollectIlluminaSummaryMetrics.java and its test