genome/genome — pull request #348 by iferguson90 (2014-12-18 21:11:35+00:00)
Title: Disable fillmd/BamQc for bsmap

We were having trouble running `fillmd` on `bsmap` alignments. This disables `fillmd` and BamQc when the aligner is set to `bsmap`.

Would like input from @jasonwalker80 before merging.