msmbuilder/msmbuilder — pull request #385 by rmcgibbo (2014-12-07 06:52:12+00:00)
Title: Fix intermitent error on implied timescaels with shape

There are still some multiprocessing-specific errors with n_jobs > 1 in `msmb Impliedtimescales`

```
[Parallel(n_jobs=2)]: Done 1 out of 10 | elapsed: 3.3s remaining: 29.8s
[Parallel(n_jobs=2)]: Done 10 out of 10 | elapsed: 3.3s finished
An unexpected error has occurred with MSMBuilder (version 3.0.0-beta.dev-7c35b0b), please
consider sending the following traceback to MSMBuilder GitHub issue tracker at:
https://github.com/msmbuilder/msmbuilder/issues
Traceback (most recent call last):
File "/home/travis/miniconda/envs/_test/bin/msmb", line 6, in
sys.exit(main())
File "/home/travis/miniconda/envs/_test/lib/python2.7/site-packages/msmbuilder-3.0.0_beta-py2.7-linux-x86_64.egg/msmbuilder/scripts/msmb.py", line 21, in main
app.start()
File "/home/travis/miniconda/envs/_test/lib/python2.7/site-packages/msmbuilder-3.0.0_beta-py2.7-linux-x86_64.egg/msmbuilder/cmdline.py", line 421, in start
instance.start()
File "/home/travis/miniconda/envs/_test/lib/python2.7/site-packages/msmbuilder-3.0.0_beta-py2.7-linux-x86_64.egg/msmbuilder/commands/implied_timescales.py", line 104, in start
df = pd.DataFrame(data=lines, columns=cols)
File "/home/travis/miniconda/envs/_test/lib/python2.7/site-packages/pandas/core/frame.py", line 239, in __init__
copy=copy)
File "/home/travis/miniconda/envs/_test/lib/python2.7/site-packages/pandas/core/frame.py", line 399, in _init_ndarray
return create_block_manager_from_blocks([values.T], [columns, index])
File "/home/travis/miniconda/envs/_test/lib/python2.7/site-packages/pandas/core/internals.py", line 3572, in create_block_manager_from_blocks
construction_error(tot_items, blocks[0].shape[1:], axes, e)
File "/home/travis/miniconda/envs/_test/lib/python2.7/site-packages/pandas/core/internals.py", line 3553, in construction_error
passed,implied))
ValueError: Shape of passed values is (1, 10), indices imply (10, 10)
```