libantioch/antioch — pull request #88 by SylvainPlessis (2014-12-05 17:36:57+00:00)
Title: Species parsing

### Common part
This is one PR of a bunch of PRs to finalize parsing, thermodynamics and transport. There will be several PRs, the only thing missing now is the merging with *master*, which will come once the setup of the PRs is made. To make things as clear as I can, all the PRs will have a common section showing the graph with a star to mark the current PR.
```
xml_parser <-- input_parsing_format <-- ascii_parser <-- species_parsing * <-- \
\
NASA polynomials <-- UnifiedThermo <---------------------------------------------- thermo_parsing <--
\ \
transport_new <------------------------ transport_thermo <--------------------------------------------- transport_thermo_parser
```
So here is the parser/thermo/transport bunch of PR. There are also two more PRs, the ```opt_transport``` and the ```almost_Exact```.
The ```opt_transport``` merges ```transport_thermo_parser``` with ```conditions_reac```, which enables to pass a ```KineticsConditions``` object instead of temperature, which translates into computing once and for all the ```TempCache``` object instead of locally where it's needed.
```almost_Exact``` takes in the ```kin_reset```.

### This PR

The species list is parseable by everyone. The main changes is certainly the names of the files, there is no more reason now to keep the _ascii_ in the name, this is the biggest change.