audy/hiseq-16s-pipeline — pull request #10 by frederic-mahe (2014-12-02 15:09:50+00:00)
Title: Typo

Interesting use of usearch. I have a very similar pipeline I use to perform taxonomic assignment of 18S amplicons, using ggsearch (from the FASTA package). I opened a thread on vsearch discussing a way to speed up computation for that type of usage (https://github.com/torognes/vsearch/issues/34).