opencb/cellbase — pull request #7 by pabarcgar (2014-11-26 12:29:12+00:00)
Title: Consequence type gbpa

- All parsers from cellbase-build now extend CellbaseParser
- Organized CelllBaseMain
- Organized serializers: all parsers use now CellBaseSerializers from cellbase-core
- Added new parsers: cosmic, gwas, cadd, disgenet, geneexpressionatlas, wig
- Added beans used on those parsers (cellbase-build/src/main/java/org/opencb/cellbase/build/transform/formats package)
- Added groovy tests for new parsers, resources used by them and dependencies for those tests to pom.xml
- Added "Ignore" to some failing tests (VariantEffectMongoDBLoaderTest and GenomeSequenceUtilsTest)
- Cellbase-server changes from develop branch