hammerlab/guacamole — pull request #235 by timodonnell (2014-11-18 02:25:28+00:00)
Title: Add -lociFromFile argument to Common

* Any caller that uses Common.Loci set of arguments now supports a -lociFromFile argument that accepts a path to a file giving loci to call at. Closes #232.
* Loci parsing now ignores all whitespace (including newlines, etc.) instead of just spaces.
* Add a test for parsing a file with containing loci