molgenis/molgenis-imputation — pull request #18 by kantale (2014-11-07 05:01:51+00:00)
Title: See comments

Major updates:
* Perform the complete analysis in a single step
* Accept option for assembly chain file for liftovering
* Update to newer version of Genotype Harmonizer
* Report at the end how to access temporary files, generated scripts and scripts output
* add --additional_shapeit_parameters, --addition_impute2_parameters
* Update the documentation