broadinstitute/oncotator — pull request #230 by alexramos (2014-11-04 17:41:26+00:00)
Title: Issue 210 bigwig support

New datasource class for bigwig format files (http://genome.ucsc.edu/goldenpath/help/bigWig.html).

This class uses the ngslib python library to fetch continuous scores from a bigwig file. For queries spanning a genomic range, the median of scores across the range are returned.