ucscCancer/icgc_rnaseq_align — pull request #1 by akahles (2014-11-03 16:24:15+00:00)
Title: Update to first version of STAR alignment SOP

- extended the wrapper to stub to the full set of current options
- included now RG line in sam header
- adapted and extended Dockerfile to reflect most recent STAR version and install pip for lxml python package