genome/genome — pull request #134 by gsanders (2014-10-23 21:40:10+00:00)
Title: Readcount error flood

Bam-readcount version 0.5 and later has the ability to suppress error messages after the first. Versions previous to this are creating huge error files (20-30gb+) full of useless warnings about bam tags. This is an effort to solve this problem, and some refactoring was done along the way.