SimTk/mdtraj — pull request #607 by rmcgibbo (2014-09-25 11:16:07+00:00)
Title: Fix for xtc segfault

#606
```
In [2]: md.open('/home/rmcgibbo/vagrant/precise64/3064-5-95-58.xtc').read()
(xdrfile error) Buffer overrun during decompression.
---------------------------------------------------------------------------
RuntimeError Traceback (most recent call last)
in ()
----> 1 md.open('/home/rmcgibbo/vagrant/precise64/3064-5-95-58.xtc').read()

/home/rmcgibbo/miniconda/lib/python2.7/site-packages/mdtraj-1.X.0-py2.7-linux-x86_64.egg/mdtraj/formats/xtc.so in xtc.XTCTrajectoryFile.read (MDTraj/formats/xtc/xtc.c:4111)()

/home/rmcgibbo/miniconda/lib/python2.7/site-packages/mdtraj-1.X.0-py2.7-linux-x86_64.egg/mdtraj/formats/xtc.so in xtc.XTCTrajectoryFile._read (MDTraj/formats/xtc/xtc.c:5560)()

RuntimeError: XTC read error: Compressed 3d coordinate
```

we should contribute this fix back upstream to gromacs too.