chapmanb/bcbio-nextgen — pull request #562 by mjafin (2014-08-26 13:49:33+00:00)
Title: Ensemble enabled for tumor-normal studies

Hi Brad,
The proposed changes:
- remove normal samples, which have no vcfs, from the ensemble evaluation
- removes filtered variants and normal samples from the tumor vcfs

I've removed VarScan from the ``run_info-cancer.yaml`` file as there's a clash between FreeBayes and VarScan headers for ``SSC``.

Comments welcome as per usual!