rmcgibbo/mdtraj — pull request #527 by kyleabeauchamp (2014-08-10 19:37:40+00:00)
Title: [WIP] Fix bug in CONECT reader in pdb

I backported this code from latest OpenMM.

Question: Should the DataFrame serial index always match the PDB numbering? Because in this case, it does not--my hard-coded test of 19782 is actually different from the numbering in the raw PDB file. Once we resolve this issue, I think we can merge.