brentp/bwa-meth — pull request #13 by ttriche (2014-07-12 23:06:12+00:00)
Title: implement Yaping's suggestions for WGBS Bis-SNP

"Btw. Don't use --non-directional-protocol option. If it is not rrbs, I will recommend to use -minConv 1.

Yaping

Sent from my iPhone"