genome/somatic-sniper — pull request #3 by ernfrid (2014-06-06 04:04:52+00:00)
Title: No loh

These commits add an option to suppress reporting of differences due to loss of heterozygosity and gain of heterozygosity at homozygous non-reference alleles. For example the following would both be suppressed,

|Ref|Tumor|Normal|
|-----|--------|---------|
|A|GG|AG|
|A|AG|GG|