samtools/htsjdk — pull request #1 by mccowan (2014-05-07 21:10:49+00:00)
Title: Add  as a new facility for reading from SAM files.

- Produces objects, which are similar to .
- Deprecate , as is the preferred approach to creating things that read SAMs. still functions as normal.
- See 's javadoc for examples of how to use it.