bigdatagenomics/avocado — pull request #51 by arahuja (2014-04-22 23:20:43+00:00)
Title: Update refid to use refname instead

- Changes due to https://github.com/bigdatagenomics/adam/pull/217

Also change BQSR pre-processing step to use broadcast due to https://github.com/bigdatagenomics/adam/pull/213