jts/sga — pull request #70 by deltadev (2014-04-03 15:39:25+00:00)
Title: sga overlap - "--prefix" option added.

There is a "--target-file" option for sga overlap but it doesn't offer the same functionality. I'm not sure if it was intended to? The implementation of "--prefix" in this patch seems to match earlier uses in the sga pipeline.

There are some .gitignore additions that I think make sense as well.