ICGC-TCGA-PanCancer/PCAP-core — pull request #16 by allisonheath (2014-03-26 21:59:03+00:00)
Title: Updated to latest versions of libmaus and biobambam

We're using biobambam/bamtofastq to split by readgroup, but this requires the most recent version 129, which also requires a newer version of libmaus. It'd be great if this could be included in the standard install, here are my changes to setup.sh that we used to install it on Bionimbus.