chapmanb/bcbio-nextgen — pull request #359 by mjafin (2014-03-18 18:35:14+00:00)
Title: Added --maxNumberOfReads option to SomaticIndelDetector based on coverag...

...e_depth_max

Hi Brad,
Here's a pull request to address https://github.com/chapmanb/bcbio-nextgen/issues/358
Otherwise for certain targeted panels with ultra deep sequencing SID might ignore regions.