genome-vendor/bioperl-ext — pull request #1 by gbeane (2014-02-11 13:44:23+00:00)
Title: fix memory leak

We ran into a problem with memory consumption when we were calling dpAlign_Local_DNA_MillerMyers many times in a loop (millions of times). The memory consumption of our program would continue to grow to 10s of GBs. With this fix, our program's memory consumption remains stable at a few MB.