OpenMS/OpenMS — pull request #678 by hroest (2014-02-10 21:27:16+00:00)
Title: [FIX] fix how swath files are annotated

small patch fixing a UTILS feature of OpenSwathWorkflow

- fix broken mapping between swath file vector and swath annotation file
(no MS1 map annotation)
- add checks for correct number of entries in the annotation files
- handle proteowizard converted files which only contain the target m/z
and no window information
- increase debug output verbosity