chapmanb/bcbio-nextgen — pull request #284 by mjafin (2014-02-02 11:46:33+00:00)
Title: Support STAR alignment disambiguation for mixed species samples

Hi Rory and Brad,
I've added support for STAR based disambiguation. It works stellar on our synthetic mix of human+mouse. Will likely be moving to STAR due to the 50x-60x speed increases we've seen!