uci-cbcl/genomix — pull request #129 by JavierJia (2014-01-21 06:24:41+00:00)
Title: Jianfeng/shift remove lowcoverage

@Elmira88 @anbangx
@jakebiesinger maybe ?

I fix the remove lowcoverage issues that remove the head kmer may lose the readSet. I passed the ReadSet to the neighbors to keep the original information.

@jakebiesinger , in order to use negative offset, I did some changes to the offset bitcode. Specificlly, I use the 24th bit as the sign position, the package and unpackage method need to check the sign bit to set or return the offset field

@Elmira88 , if possible, you can also use this branch to test the new graph to see if the result may change ?