juliema/TRAM — pull request #79 by daisieh (2013-12-20 06:40:00+00:00)
Title: Sort contigs

Sorts contigs returned in .best.fasta, with highest blast score first (and secondarily sorted by longest sequence, if scores are equal).

Also increased stringency of best contigs: now returns any contigs within 100 of the highest-scoring contig.