opencobra/cobrapy — pull request #35 by danielhyduke (2013-10-02 23:50:34+00:00)
Title: Deprecations of assess_objective and introduction of cobra.flux_analysis.reaction.assess*

In response to https://github.com/opencobra/cobrapy/issues/34, I've deprecated the assess_objective function because it's not really capable of assessing a multi-reaction linear objective. I've introduced the module: cobra.flux_analysis.reaction that can be used to assess whether a given model has:

1) the capacity to absorb products of a reaction operating at, or above, a specified flux
2) the capacity to produce precursors for a reaction operating at, or above, a specified flux