nipy/dipy — pull request #240 by maurozucchelli (2013-09-04 21:52:45+00:00)
Title: Dsi metrics

This pull request if fixing some bugs in dsi.py and also add some dsi metrics like return to origin probability (rtop) and mean square displacement (msd).
The fixed bugs in dsi.py are:
- when the signal is inserted in the 3D grid before the fourier transform a value was missing, since the length of the signal was taken without the b0.
- the fourier transform generated some ringing effect in the propagator. Instead of taking the absolute values that amplify this artefact it is better to take only the real part of the signal and clip the negative values to 0. This gives a noiseless odf.