molgenis/molgenis — pull request #400 by dennishendriksen (2013-06-05 09:20:38+00:00)
Title: Cleanup database interface + other stuff

- Harmonize molgenis-app-omx molgenis_ui.xml with molgenis-app-lifelines molgenis_ui.xml
- Resolve some Findbugs issues
- Cleanup database interface, remove mostly stuff not working with JPA:
- public Connection getConnection() <-- always threw a UnsupportedOpExc
- public void createTables() <--- not working with Hibernate4
- public void updateTables() <--- not working with Hibernate4
- public void dropTables() <--- not working with Hibernate4
- public void loadExampleData(ExampleData exampleData) <-- use mock in tests instead
- public List findByExample(E example) <-- used getConnection
- public List sql(String query, QueryRule... queryRules) <-- used getConnection
- Remove non-compiling generated tests classes that don't have a reference in Molgenis.java, rewrite in the future like other generated tests