arensburger/RNAseq-clean — pull request #1 by thclarke (2013-05-20 16:59:33+00:00)
Title: Create clean_pair.thc.pl

This is the corrected version of clean_pair.pl with the following fixes: changed the temporary files to be created in the $PATH to allow for users with only local write access; also corrected the artifact trimming step to be skipped for libraries with no unpaired reads after the TRIMMOMATIC steps