chipster/chipster — pull request #4 by ilarischeinin (2013-04-04 12:10:35+00:00)
Title: Bugfix for copy number tools

Fixes a bug in six copy number tools related to phenodata column names that contain spaces.

The bug probably affects all tools that have a METACOLUMN_SEL parameter. The fix is to include check.names=FALSE in the read.table command for the phenodata file.