fhcrc/deenurp — pull request #3 by cmccoy (2013-02-04 21:03:45+00:00)
Title: filter-outliers: need option to skip pruning from taxids represented by < N sequences

I think that a sensible default would be five sequences - I'm not sure that the pruning-by-medoid heuristic is going to be a good idea for taxids represented by only a few sequences, and it would be best to be conservative (and allow this param to be user-defined).