biopython/biopython — pull request #122 by bow (2012-12-09 18:34:01+00:00)
Title: Fixes, refactors, and new features for for SearchIO hmmer*-text

This pull request adds an indexer for `hmmer2-text` format. In addition, there were small fixes, code refactors in `Bio.SearchIO.HmmerIO`, and several new `hmmer2-text` tests.