qiime/qiime — pull request #480 by davidsoergel (2012-11-29 05:49:17+00:00)
Title: Add options to assign_taxonomy.py to pass alternate regexes to RTAX for FASTA header parsing.

Needed to run RTAX with newer Illumina fasta headers like
>HWI-ST180:243:C0589ACXX:2:1101:2600:1888 1:N:0:AGTCAGA