tzcoolman/DRASS — pull request #29 by brainstorm (2012-11-16 16:23:18+00:00)
Title: Revamp main function, should resemble bwa structure

* Outputs counts in JSON format for better testing/parsing and postprocessing.
* Refactoring getopts in the build.
* More flexible/clean Makefile.
* 1000 genomes test.