ModelSEED/ModelSEED — pull request #110 by devoid (2012-10-09 16:43:49+00:00)
Title: Fixes for KBase clients, fix ms list command

- Fix ms list command, now lists all owned and visible aliases
by default. Still has the --mine or -m flag for only listing your
objects.

- Fix Composite class to work with KBaseRPC
- Fix KBaseRPC to strip the Auth object, cast ModelSEED::Reference
objects back into strings for wire serialization.

Ready to merge. Probably won't pass tests until the jenkins branch is merged.