karinils/supersmart-phylota — pull request #14 by rvosa (2012-10-02 19:56:17+00:00)
Title: ExaML and GI2AA

some more variables and make targets for pre-processing the supermatrix into the binary format that ExaML expects, and for creating the mapping between nucleotide sequence GIs and amino acid sequences to BLAST against the InParanoid local BLAST database.