chapmanb/cloudbiolinux — pull request #48 by jmchilton (2012-08-18 06:16:17+00:00)
Title: Work on cloudbio/galaxy/applications.py

Work on harmonizing cloudbio/galaxy/applications.py with the CBL custom applications framework and existing install procedures (reusing macs, bowtie, bfast, bwa, samtools, ucsc tools, abyss, velvet, emboss, lastz, perm, mosiak, and freebayes). Rewrote @_if_not_installed to look at tool config directories instead of the default path if installing as Galaxy dependency. Implemented ability to have multiple versions of a tool.

Creating a pull request so you and Enis can comment on it if you would like before I merge. Unless I hear any objections, I will merge it in a few days.