BRAINSia/BRAINSStandAlone — pull request #102 by aghayoor (2012-07-27 18:05:31+00:00)
Title: All the BCD tests are fixed now

Test project /Volumes/scratch/aghayoor/release/BRAINSTools-build
Start 69: BRAINSConstellationDetectorTest_acLowerBound
Start 94: landmarksConstellationWeightsTest
Start 74: BRAINSConstellationDetectorTest_mspLevel
Start 73: BRAINSConstellationDetectorTest_interpolationMode
1/95 Test #69: BRAINSConstellationDetectorTest_acLowerBound ........................ Passed 461.79 sec
Start 85: BRAINSConstellationDetectorTest_T1_outputVolume
2/95 Test #73: BRAINSConstellationDetectorTest_interpolationMode ................... Passed 478.47 sec
Start 87: BRAINSConstellationDetectorTest_writeBranded2DImage
3/95 Test #74: BRAINSConstellationDetectorTest_mspLevel ............................ Passed 501.12 sec
Start 72: BRAINSConstellationDetectorTest_cutOutHeadInOutputVolume
4/95 Test #85: BRAINSConstellationDetectorTest_T1_outputVolume ..................... Passed 449.37 sec
Start 75: BRAINSConstellationDetectorTest_otsuThreshold
5/95 Test #72: BRAINSConstellationDetectorTest_cutOutHeadInOutputVolume ............ Passed 448.52 sec
Start 76: BRAINSConstellationDetectorTest_outputUntransformedClippedVolume
6/95 Test #87: BRAINSConstellationDetectorTest_writeBranded2DImage ................. Passed 492.20 sec
Start 78: BRAINSConstellationDetectorTest_rescaleIntensity
7/95 Test #75: BRAINSConstellationDetectorTest_otsuThreshold ....................... Passed 453.17 sec
Start 79: BRAINSConstellationDetectorTest_rescaleIntensityRange
8/95 Test #76: BRAINSConstellationDetectorTest_outputUntransformedClippedVolume .... Passed 440.95 sec
Start 84: BRAINSConstellationDetectorTest_T1_outputResampledVolume
9/95 Test #78: BRAINSConstellationDetectorTest_rescaleIntensity .................... Passed 441.13 sec
Start 82: BRAINSConstellationDetectorTest_rVN4
10/95 Test #79: BRAINSConstellationDetectorTest_rescaleIntensityRange ............... Passed 444.48 sec
Start 77: BRAINSConstellationDetectorTest_rac
11/95 Test #94: landmarksConstellationWeightsTest ................................... Passed 1834.13 sec
Start 81: BRAINSConstellationDetectorTest_rpc
12/95 Test #84: BRAINSConstellationDetectorTest_T1_outputResampledVolume ............ Passed 445.98 sec
Start 86: BRAINSConstellationDetectorTest_trimRescaledIntensities
13/95 Test #82: BRAINSConstellationDetectorTest_rVN4 ................................ Passed 445.44 sec
Start 80: BRAINSConstellationDetectorTest_rmpj
14/95 Test #77: BRAINSConstellationDetectorTest_rac ................................. Passed 436.00 sec
Start 83: BRAINSConstellationDetectorTest_rVN4-rpc-rac-rmpj
15/95 Test #81: BRAINSConstellationDetectorTest_rpc ................................. Passed 431.18 sec
Start 89: BRAINSConstellationDetectorTestForLandmarkCompare
16/95 Test #86: BRAINSConstellationDetectorTest_trimRescaledIntensities ............. Passed 434.50 sec
Start 71: BRAINSConstellationDetectorTest_cutOutHeadInOutputResampledVolume
17/95 Test #80: BRAINSConstellationDetectorTest_rmpj ................................ Passed 419.47 sec
Start 70: BRAINSConstellationDetectorTest_backgroundValue
18/95 Test #83: BRAINSConstellationDetectorTest_rVN4-rpc-rac-rmpj ................... Passed 421.46 sec
Start 23: TEST_SurfaceMultiResRegistration1
19/95 Test #89: BRAINSConstellationDetectorTestForLandmarkCompare ................... Passed 442.02 sec
Start 88: BRAINSConstellationDetectorTest_inputLandmarksEMSP
20/95 Test #71: BRAINSConstellationDetectorTest_cutOutHeadInOutputResampledVolume ... Passed 445.96 sec
Start 49: TEST_SurfaceLabelCleanUp
21/95 Test #70: BRAINSConstellationDetectorTest_backgroundValue ..................... Passed 446.28 sec
Start 58: BRAINSEyeDetectorTest_T1
22/95 Test #58: BRAINSEyeDetectorTest_T1 ............................................ Passed 87.45 sec
Start 60: BRAINSConstellationDetectorTest_forceHoughReportFailure
23/95 Test #49: TEST_SurfaceLabelCleanUp ............................................ Passed 123.34 sec
Start 59: BRAINSAlignMSPTest_T1
24/95 Test #60: BRAINSConstellationDetectorTest_forceHoughReportFailure ............. Passed 62.64 sec
Start 15: TEST_BRAINSSurfaceGeneration
25/95 Test #59: BRAINSAlignMSPTest_T1 ............................................... Passed 55.87 sec
Start 27: TEST_SurfaceAverageScalarsByResampling
26/95 Test #15: TEST_BRAINSSurfaceGeneration ........................................ Passed 26.69 sec
Start 51: TEST_SurfaceWarpQuadEdgeMesh
27/95 Test #27: TEST_SurfaceAverageScalarsByResampling .............................. Passed 16.31 sec
Start 4: ValidateBRAINSResampleTest6_nii
28/95 Test #51: TEST_SurfaceWarpQuadEdgeMesh ........................................ Passed 13.79 sec
Start 53: TEST_SurfaceProbabilityLabels
29/95 Test #53: TEST_SurfaceProbabilityLabels ....................................... Passed 2.54 sec
Start 54: COMPARE_SurfaceProbabilityLabels
30/95 Test #4: ValidateBRAINSResampleTest6_nii ..................................... Passed 6.53 sec
Start 57: TEST_SurfaceQuadEdgeMeshSimilarity
31/95 Test #54: COMPARE_SurfaceProbabilityLabels .................................... Passed 6.51 sec
32/95 Test #57: TEST_SurfaceQuadEdgeMeshSimilarity .................................. Passed 5.00 sec
Start 43: TEST_SurfaceColor
Start 63: BRAINSTrimForegroundInDirectionTest_T1
33/95 Test #43: TEST_SurfaceColor ................................................... Passed 4.27 sec
34/95 Test #63: BRAINSTrimForegroundInDirectionTest_T1 .............................. Passed 4.35 sec
Start 29: TEST_SurfaceCombineLabels
Start 45: TEST_SurfaceRemoveTinyLabels
35/95 Test #29: TEST_SurfaceCombineLabels ........................................... Passed 1.80 sec
36/95 Test #45: TEST_SurfaceRemoveTinyLabels ........................................ Passed 1.89 sec
Start 30: COMPARE_SurfaceCombineLabels
Start 46: COMPARE_SurfaceRemoveTinyLabels
37/95 Test #46: COMPARE_SurfaceRemoveTinyLabels ..................................... Passed 2.93 sec
38/95 Test #30: COMPARE_SurfaceCombineLabels ........................................ Passed 3.04 sec
Start 47: TEST_RearrangeSurfaceLabels
Start 44: COMPARE_SurfaceColor
39/95 Test #47: TEST_RearrangeSurfaceLabels ......................................... Passed 1.80 sec
Start 48: COMPARE_RearrangeSurfaceLabels
40/95 Test #44: COMPARE_SurfaceColor ................................................ Passed 2.90 sec
Start 50: COMPARE_SurfaceLabelCleanUp
41/95 Test #48: COMPARE_RearrangeSurfaceLabels ...................................... Passed 2.54 sec
Start 11: TEST_BRAINSSurfaceFlattening0
42/95 Test #50: COMPARE_SurfaceLabelCleanUp ......................................... Passed 2.45 sec
Start 13: TEST_BRAINSSurfaceFlattening1
43/95 Test #11: TEST_BRAINSSurfaceFlattening0 ....................................... Passed 1.83 sec
Start 8: ValidateBRAINSResampleTest3_nii
44/95 Test #13: TEST_BRAINSSurfaceFlattening1 ....................................... Passed 2.12 sec
Start 3: ValidateBRAINSResampleTest5_nii
45/95 Test #8: ValidateBRAINSResampleTest3_nii ..................................... Passed 1.72 sec
Start 5: ValidateBRAINSResampleTest7_nii
46/95 Test #3: ValidateBRAINSResampleTest5_nii ..................................... Passed 1.62 sec
47/95 Test #5: ValidateBRAINSResampleTest7_nii ..................................... Passed 1.39 sec
Start 17: TEST_BRAINSApplySurfaceLabels
Start 28: COMPARE_SurfaceAverageScalarsByResampling
48/95 Test #23: TEST_SurfaceMultiResRegistration1 ................................... Passed 276.00 sec
Start 52: COMPARE_SurfaceWarpQuadEdgeMesh
49/95 Test #52: COMPARE_SurfaceWarpQuadEdgeMesh ..................................... Passed 0.84 sec
50/95 Test #28: COMPARE_SurfaceAverageScalarsByResampling ........................... Passed 1.35 sec
Start 39: TEST_SurfaceIcosahedronResampler1
Start 9: TEST_BRAINSAssignSurfaceFeatures
51/95 Test #17: TEST_BRAINSApplySurfaceLabels ....................................... Passed 1.50 sec
Start 7: ValidateBRAINSResampleTest2_nii
52/95 Test #39: TEST_SurfaceIcosahedronResampler1 ................................... Passed 1.05 sec
Start 19: TEST_BRAINSMeasureSurface0
53/95 Test #19: TEST_BRAINSMeasureSurface0 .......................................... Passed 0.32 sec
Start 24: COMPARE_SurfaceMultiResRegistration1
54/95 Test #9: TEST_BRAINSAssignSurfaceFeatures .................................... Passed 1.39 sec
Start 2: ValidateBRAINSResampleTest4_nii
55/95 Test #7: ValidateBRAINSResampleTest2_nii ..................................... Passed 1.48 sec
Start 33: TEST_SurfaceHistogramMatching
56/95 Test #2: ValidateBRAINSResampleTest4_nii ..................................... Passed 0.33 sec
57/95 Test #24: COMPARE_SurfaceMultiResRegistration1 ................................ Passed 0.87 sec
Start 25: TEST_SurfaceAssignArray
Start 66: landmarksConstellationAlignerTest
58/95 Test #33: TEST_SurfaceHistogramMatching ....................................... Passed 0.77 sec
Start 10: COMPARE_BRAINSAssignSurfaceFeatures
59/95 Test #10: COMPARE_BRAINSAssignSurfaceFeatures ................................. Passed 0.14 sec
60/95 Test #25: TEST_SurfaceAssignArray ............................................. Passed 1.04 sec
Start 31: TEST_SurfaceClampScalars
Start 40: TEST_SurfaceIcosahedronResampler2
61/95 Test #66: landmarksConstellationAlignerTest ................................... Passed 1.46 sec
62/95 Test #31: TEST_SurfaceClampScalars ............................................ Passed 0.54 sec
63/95 Test #40: TEST_SurfaceIcosahedronResampler2 ................................... Passed 0.52 sec
Start 37: TEST_SurfaceSmoothingMeshScalars
Start 6: ValidateBRAINSResampleTest1_nii
Start 55: TEST_SurfaceResampleQuadEdgeMesh
64/95 Test #6: ValidateBRAINSResampleTest1_nii ..................................... Passed 0.44 sec
65/95 Test #37: TEST_SurfaceSmoothingMeshScalars .................................... Passed 0.56 sec
66/95 Test #55: TEST_SurfaceResampleQuadEdgeMesh .................................... Passed 0.61 sec
Start 1: PrettyPrintTableTest
Start 35: TEST_SurfacePiecewiseRescale
Start 91: BRAINSConstellationDetectorTest_outputLandmarksInInputSpace
67/95 Test #1: PrettyPrintTableTest ................................................ Passed 0.24 sec
68/95 Test #91: BRAINSConstellationDetectorTest_outputLandmarksInInputSpace ......... Passed 0.22 sec
Start 90: BRAINSConstellationDetectorTest_outputLandmarksInACPCAlignedSpace
Start 93: BRAINSConstellationDetectorTest_LandmarksPaired
69/95 Test #35: TEST_SurfacePiecewiseRescale ........................................ Passed 0.34 sec
70/95 Test #90: BRAINSConstellationDetectorTest_outputLandmarksInACPCAlignedSpace ... Passed 0.11 sec
71/95 Test #93: BRAINSConstellationDetectorTest_LandmarksPaired ..................... Passed 0.10 sec
Start 32: COMPARE_SurfaceClampScalars
Start 61: BRAINSConstellationDetectorTest_inputVolumeError
Start 56: COMPARE_SurfaceResampleQuadEdgeMesh
72/95 Test #61: BRAINSConstellationDetectorTest_inputVolumeError .................... Passed 0.11 sec
73/95 Test #32: COMPARE_SurfaceClampScalars ......................................... Passed 0.11 sec
74/95 Test #56: COMPARE_SurfaceResampleQuadEdgeMesh ................................. Passed 0.13 sec
Start 26: COMPARE_SurfaceAssignArray
Start 41: COMPARE_SurfaceIcosahedronResampler1
Start 38: COMPARE_SurfaceSmoothingMeshScalars
75/95 Test #26: COMPARE_SurfaceAssignArray .......................................... Passed 0.11 sec
76/95 Test #38: COMPARE_SurfaceSmoothingMeshScalars ................................. Passed 0.14 sec
77/95 Test #41: COMPARE_SurfaceIcosahedronResampler1 ................................ Passed 0.15 sec
Start 34: COMPARE_SurfaceHistogramMatching
Start 36: COMPARE_SurfacePiecewiseRescale
Start 62: BRAINSConstellationDetectorTest_LLSModelError
78/95 Test #34: COMPARE_SurfaceHistogramMatching .................................... Passed 0.21 sec
79/95 Test #36: COMPARE_SurfacePiecewiseRescale ..................................... Passed 0.21 sec
80/95 Test #62: BRAINSConstellationDetectorTest_LLSModelError ....................... Passed 0.20 sec
Start 68: BCD_HELP_TEST
Start 14: COMPARE_BRAINSSurfaceFlattening1
Start 22: TEST_BRAINSMeasureSurface3
81/95 Test #14: COMPARE_BRAINSSurfaceFlattening1 .................................... Passed 0.11 sec
82/95 Test #68: BCD_HELP_TEST ....................................................... Passed 0.11 sec
83/95 Test #22: TEST_BRAINSMeasureSurface3 .......................................... Passed 0.11 sec
Start 18: COMPARE_BRAINSApplySurfaceLabels
Start 16: COMPARE_BRAINSSurfaceGeneration
Start 21: TEST_BRAINSMeasureSurface2
84/95 Test #18: COMPARE_BRAINSApplySurfaceLabels .................................... Passed 0.17 sec
85/95 Test #21: TEST_BRAINSMeasureSurface2 .......................................... Passed 0.15 sec
86/95 Test #16: COMPARE_BRAINSSurfaceGeneration ..................................... Passed 0.17 sec
Start 20: TEST_BRAINSMeasureSurface1
Start 42: COMPARE_SurfaceIcosahedronResampler2
Start 12: COMPARE_BRAINSSurfaceFlattening0
87/95 Test #42: COMPARE_SurfaceIcosahedronResampler2 ................................ Passed 0.13 sec
88/95 Test #12: COMPARE_BRAINSSurfaceFlattening0 .................................... Passed 0.11 sec
89/95 Test #20: TEST_BRAINSMeasureSurface1 .......................................... Passed 0.13 sec
Start 92: BRAINSConstellationDetectorTest_outputLandmarkWeights
Start 67: landmarksAlignerCompareTest
Start 64: insertMidACPCpointTest
90/95 Test #67: landmarksAlignerCompareTest ......................................... Passed 0.12 sec
91/95 Test #92: BRAINSConstellationDetectorTest_outputLandmarkWeights ............... Passed 0.12 sec
Start 95: landmarksWeightsCompareTest
92/95 Test #95: landmarksWeightsCompareTest ......................................... Passed 0.11 sec
93/95 Test #64: insertMidACPCpointTest .............................................. Passed 0.42 sec
Start 65: MidACPCpointCompareTest
94/95 Test #65: MidACPCpointCompareTest ............................................. Passed 0.10 sec
95/95 Test #88: BRAINSConstellationDetectorTest_inputLandmarksEMSP .................. Passed 277.29 sec

100% tests passed, 0 tests failed out of 95

Total Test time (real) = 2984.98 sec