biojava/biojava — pull request #2 by CarmeloFoti (2012-07-13 09:37:32+00:00)
Title: Added Indexes on FeatureList

Added a new method to the class GFF3Reader:

public static FeatureList read(String filename, List indexes)

this method will create an index for each attribute present in the List indexes. In this way, a massive improvement in performance will occur.

In addition, the String.split() method is now being used during the Feature creation (as it was suggested in the code comments).