biom-format/biom-format — pull request #27 by joey711 (2012-06-22 05:57:28+00:00)
Title: Added R-code directory, which includes installable "rbiom" package

The package itself should be submitted to Bioconductor when we think it is ready. It is already built-out enough and documented enough for testing. It contains some unit tests and examples. It lacks a vignette, any integration with trees (is that Newick-string idea incorporated into the file format yet? Examples of it?), and also lacks any package-internal data stored as RData binaries in the "data" top-level directory.

All currently-included functions/classes are documented. A vignette and example data are the two biggest criteria holding back submission to Bioconductor.

Other features needed:
- write-to-biom
- installation instructions in the absence of it sitting in an R repo or top-level GitHub repo