mlandis/phylowood — pull request #3 by trvrb (2012-06-15 12:51:18+00:00)
Title: BEAST output conversation and automatic generation of map defaults from data.

Included a script (`beast-to-phylowood.rb`) to convert a MCC tree from BEAST to Phylowood format. I've run this script on the flu phylogeographic data to produce `flu.phw`. This has a big tree with 819 tips, but only 14 locations. Pretty much the opposite of `bayarea.eg.out`.

I've also modified the Polymaps initialization to take map bounds from `geoCoords`. I set the map center as the mean of geoCoords and zoom out until all the geoCoords are in view.