dzerbino/velvet — pull request #16 by hacchy (2012-05-29 11:43:37+00:00)
Title: Update MetaVelvet-1.1.01 -> MetaVelvet-1.2.01

Dear Dr. Zerbino,

We are pleased to inform you that we released a new version of MetaVelvet (1.2.01).
Major changes include:
- enable to use paired-end information in a graph decomposition step.
- three options are newly added in order to specify how to use paired-end connections for graph decomposition: -valid_connections, -noise_connections, and -use_connections.
- for details, please see "Advanced topic 3: how to use paired-end information for graph decompositoin" in our web site http://metavelvet.dna.bio.keio.ac.jp/.

I removed previous contrib/MetaVelvet-1.1.01 directory and newly created contrib/MetaVelvet-1.2.01 directory.
No code is changed for other directories.

We are very happy if you kindly merge our changes.
Very sincerely yours,

Tsuyoshi