indraniel/sff2fastq — pull request #1 by jamescasbon (2012-05-11 10:52:35+00:00)
Title: Do not abort on zero length reads

eg....

Read Header Len: 32
Name Length: 14
# of Bases: 43
Clip Qual Left: 15
Clip Qual Right: 12
Clip Adap Left: 0
Clip Adap Right: 0

Flowgram: 1.12 0.00 1.18 0.00 0.12 0.90 0.00 1.03 0.00 0.82 0.00 1.15 0.86 0.00 0.51 0.16 0.60 0.33 1.10 0.00 1.22 0.46 0.49 1.17 0.35 0.00 0.27 0.41
Flow Indexes: 1 3 6 8 10 12 13 15 17 19 21 24 29 31 34 35 37 39 45 47 49 52 53 56 58 58 58 60
Bases: tcagcgactgtacgactcactatagggagaccgttgtgtctgg
Quality Scores: 29 29 26 25 25 25 15 10 10 10 18 16 17 21 23 17 17 17 28 27 25 28 28 26 26 26 13 20