bioperl/bioperl-live — pull request #32 by fschwach (2012-01-13 22:37:20+00:00)
Title: Added option to create new Bio::Seq objects via clone instead of calling new

As discussed on the BioPerl mailing list, this version adds the option to use Bio::Root::Root::clone to create new Bio::Seq objects inside the 'delete' and 'insert' methods to allow working with Bio::SeqI objects that do not allow to call new. The default behaviour is unchanged, i.e. new objects are created, not cloned.