BRAINSia/BRAINSStandAlone — pull request #35 by aghayoor (2012-01-06 23:44:38+00:00)
Title: Adding some new programs to BCD

I wrote a new program to do the landmark alignment procedure independently from BRAINSConstellationDetector. It is named "landmarksConstellationAligner" and is set in the "src" directory. This program fixes the previous bug inside the BCD which needed the LLSModel through the aligning procedure.
Also, two new programs named "GenerateAverageLmkFile.cxx" and "LmkStatistics.cxx" are set in a new directory named "BRAINSConstellationDetector/landmarkStatistics/". The first program generates a new landmark file as its output, which is the average between some input landmark files, and the second program is used for comparing several landmark files (fcsv files). This program extracts the average, variance and standard deviation of the errors between several pairs of fcsv files. The beginning of each program is fully commented which describes the use of them.