jquery/web-base-template — pull request #26 by peol (2011-12-13 18:06:50+00:00)
Title: Huge cleanup of CLRF line endings, 51 files modified

I'm not sure were we stand on issues like these, but Github seems to like that you turn the autocrlf option on to avoid these issues in the future:
http://help.github.com/line-endings/

"Now that you’ve standardized the newlines in your repo things should be better. However, every person that touches your repo should turn autocrlf on, even non-Windows users. It is possible for them to bring in code from an outside source that has CRLF newlines, and you don’t want them saved into the repo like that.

For more details on the core.autocrlf setting see the git-config documentation."