sanger-pathogens/vr-codebase — pull request #35 by CraigPorter (2011-11-22 13:25:18+00:00)
Title: Fix to fastq import - delete bams after fastq gzipped.

Fix for bug in import of fastqs.

The job would occasionally hit the LSF runtime limit during the fastq compression step. This killed the job just after the input bam files had been deleted preventing the pipeline rerunning the job.