CellProfiler/CellProfiler-Analyst — Issue #14: Dimension Reduction issuesCPA Dimension Reduction issues: 
Author: dlogan
Created: 2012-02-24 16:27:24+00:00
State: open
Labels: Bug

I was curious what the mysterious "Dimension Reduction" button did. Silly me...

(I'd say this issue is low priority, since there is no documentation about what this does, so there is no implied warranty)

This was using CPA compiled 11710 on Mac 10.6.8

To reproduce:
* Load Classifier with ExampleImages/example pre-made training set
* Score All (Dim Red. button was grayed out before this, I believe)
* Dimension Reduction button pressed
* It was working, but reported it was going to take hours
* I hit Cancel and immediately got this exception http://cl.ly/3Z3o1u040K1g2O0R0b33, then got spinny beachball
* After 30 seconds or so CPA then crashed with this Apple crashlog:

Process: CPAnalyst [50369]
Path: /Applications/CPAnalyst.app/Contents/MacOS/CPAnalyst
Identifier: org.pythonmac.unspecified.CPAnalyst
Version: 0.0.0 (0.0.0)
Code Type: X86 (Native)
Parent Process: launchd [2684]

Date/Time: 2012-02-24 11:15:16.001 -0500
OS Version: Mac OS X 10.6.8 (10K549)
Report Version: 6

Interval Since Last Report: 119230 sec
Crashes Since Last Report: 9
Per-App Interval Since Last Report: 177559 sec
Per-App Crashes Since Last Report: 1
Anonymous UUID: 55F89358-6582-4D77-8DB6-7FEE481104C1

Exception Type: EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_PROTECTION_FAILURE at 0x0000000000000000
Crashed Thread: 0 Dispatch queue: com.apple.main-thread

Application Specific Information:

Java information:
Exception type: Bus Error (0xa) at pc=0000000003286707

Java VM: Java HotSpot(TM) Client VM (20.1-b02-384 mixed mode macosx-x86)

Current thread (0000000044009c00): JavaThread "Thread-1" daemon [_thread_in_native, id=-1600158400, stack(00000000bf800000,00000000c0000000)]
Stack: [00000000bf800000,00000000c0000000]

Java Threads: ( => current thread )
000000004481bc00 JavaThread "Thread-3" daemon [_thread_in_native, id=-1318584320, stack(00000000b1600000,00000000b1680000)]
=>0000000044009c00 JavaThread "Thread-1" daemon [_thread_in_native, id=-1600158400, stack(00000000bf800000,00000000c0000000)]
0000000044807000 JavaThread "Low Memory Detector" daemon [_thread_blocked, id=-1320505344, stack(00000000b13ab000,00000000b14ab000)]
0000000045001000 JavaThread "C1 CompilerThread0" daemon [_thread_blocked, id=-1321562112, stack(00000000b12a9000,00000000b13a9000)]
0000000045000000 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=-1322618880, stack(00000000b11a7000,00000000b12a7000)]
0000000044008400 JavaThread "Surrogate Locker Thread (Concurrent GC)" daemon [_thread_blocked, id=-1323675648, stack(00000000b10a5000,00000000b11a5000)]
0000000044003000 JavaThread "Finalizer" daemon [_thread_blocked, id=-1324732416, stack(00000000b0fa3000,00000000b10a3000)]
0000000044002000 JavaThread "Reference Handler" daemon [_thread_blocked, id=-1325789184, stack(00000000b0ea1000,00000000b0fa1000)]
000000001b801c00 JavaThread "main" [_thread_in_native, id=-1340583936, stack(00000000b0105000,00000000b0185000)]
Other Threads:
000000001b9e4800 VMThread [stack: 00000000b0d9f000,00000000b0e9f000] [id=-1326845952]
0000000044810800 WatcherThread [stack: 00000000b14fe000,00000000b15fe000] [id=-1319116800]

VM state:not at safepoint (normal execution)
VM Mutex/Monitor currently owned by a thread: None

Heap
par new generation total 14784K, used 0K [000000001e190000, 000000001f190000, 0000000022190000)
eden space 13184K, 0% used [000000001e190000, 000000001e190000, 000000001ee70000)
from space 1600K, 0% used [000000001ee70000, 000000001ee70000, 000000001f000000)
to space 1600K, 0% used [000000001f000000, 000000001f000000, 000000001f190000)
concurrent mark-sweep generation total 49152K, used 5070K [0000000022190000, 0000000025190000, 000000003e190000)
concurrent-mark-sweep perm gen total 18660K, used 11121K [000000003e190000, 000000003f3c9000, 0000000042190000)

Code Cache [000000001c101000, 000000001c352000, 000000001e101000)
total_blobs=1145 nmethods=1010 adapters=78 free_code_cache=31135936 largest_free_block=256

Virtual Machine Arguments:
JVM Args: -Dloci.bioformats.loaded=true -Xmx512m -Dplugins.dir=/Users/dlogan/Downloads/ImageJ_plugins -Djava.awt.headless=true
Java Command:
Launcher Type: generic
Physical Memory: Page Size = 4k, Total = 4096M, Free = 8M

Thread 0 Crashed: Dispatch queue: com.apple.main-thread
0 org.python.python	0x03286707 PyUnicodeUCS2_AsWideChar + 71
1 _core_.so	0x169c4fd9 wxString_in_helper(_object*) + 223
2 _controls_.so	0x17a53602 wxPyPickerBase::GetPickerStyle(long) const + 162470
3 org.python.python	0x032c54bb PyEval_EvalFrameEx + 21131
4 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
5 org.python.python	0x032c53a1 PyEval_EvalFrameEx + 20849
6 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
7 org.python.python	0x0323cc12 function_call + 162
8 org.python.python	0x0320a305 PyObject_Call + 85
9 org.python.python	0x0321cbf6 instancemethod_call + 422
10 org.python.python	0x0320a305 PyObject_Call + 85
11 org.python.python	0x032bf29e PyEval_CallObjectWithKeywords + 78
12 _core_.so	0x169cbb16 wxPyCallback::EventThunker(wxEvent&) + 234
13 libwx_macud-2.8.0.dylib	0x16bc785e wxEvtHandler::ProcessEventIfMatches(wxEventTableEntryBase const&, wxEvtHandler*, wxEvent&) + 108
14 libwx_macud-2.8.0.dylib	0x16bc7904 wxEvtHandler::SearchDynamicEventTable(wxEvent&) + 80
15 libwx_macud-2.8.0.dylib	0x16bc8703 wxEvtHandler::ProcessEvent(wxEvent&) + 225
16 libwx_macud-2.8.0.dylib	0x16c977cd wxAppBase::SendIdleEvents(wxWindow*, wxIdleEvent&) + 133
17 libwx_macud-2.8.0.dylib	0x16c97d09 wxAppBase::ProcessIdle() + 127
18 libwx_macud-2.8.0.dylib	0x16bead05 wxApp::MacDoOneEvent() + 199
19 libwx_macud-2.8.0.dylib	0x16c05232 wxEventLoop::Dispatch() + 32
20 libwx_macud-2.8.0.dylib	0x16c02cf8 wxDialog::DoShowModal() + 188
21 libwx_macud-2.8.0.dylib	0x16c02e63 wxDialog::Show(bool) + 83
22 libwx_macud-2.8.0.dylib	0x16c02c30 wxDialog::ShowModal() + 54
23 _windows_.so	0x178db49c wxPyPreviewControlBar::SetZoomControl(int) + 69010
24 org.python.python	0x032c54bb PyEval_EvalFrameEx + 21131
25 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
26 org.python.python	0x032c53a1 PyEval_EvalFrameEx + 20849
27 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
28 org.python.python	0x0323cc12 function_call + 162
29 org.python.python	0x0320a305 PyObject_Call + 85
30 org.python.python	0x032bf29e PyEval_CallObjectWithKeywords + 78
31 org.python.python	0x032ec040 PyErr_PrintEx + 208
32 org.python.python	0x032ec332 PyErr_Print + 18
33 _core_.so	0x169cbd75 wxPyCallback::EventThunker(wxEvent&) + 841
34 libwx_macud-2.8.0.dylib	0x16bc785e wxEvtHandler::ProcessEventIfMatches(wxEventTableEntryBase const&, wxEvtHandler*, wxEvent&) + 108
35 libwx_macud-2.8.0.dylib	0x16bc7904 wxEvtHandler::SearchDynamicEventTable(wxEvent&) + 80
36 libwx_macud-2.8.0.dylib	0x16bc8703 wxEvtHandler::ProcessEvent(wxEvent&) + 225
37 libwx_macud-2.8.0.dylib	0x16d1bfcd wxWindowBase::TryParent(wxEvent&) + 101
38 libwx_macud-2.8.0.dylib	0x16bc86cf wxEvtHandler::ProcessEvent(wxEvent&) + 173
39 libwx_macud-2.8.0.dylib	0x16d1bfcd wxWindowBase::TryParent(wxEvent&) + 101
40 libwx_macud-2.8.0.dylib	0x16bc86cf wxEvtHandler::ProcessEvent(wxEvent&) + 173
41 libwx_macud-2.8.0.dylib	0x16d1bfcd wxWindowBase::TryParent(wxEvent&) + 101
42 libwx_macud-2.8.0.dylib	0x16bc86cf wxEvtHandler::ProcessEvent(wxEvent&) + 173
43 libwx_macud-2.8.0.dylib	0x16d1bfcd wxWindowBase::TryParent(wxEvent&) + 101
44 libwx_macud-2.8.0.dylib	0x16bc86cf wxEvtHandler::ProcessEvent(wxEvent&) + 173
45 libwx_macud-2.8.0.dylib	0x16bfa505 wxControl::ProcessCommand(wxCommandEvent&) + 27
46 libwx_macud-2.8.0.dylib	0x16bf514a wxButton::MacControlHit(void*, void*) + 62
47 libwx_macud-2.8.0.dylib	0x16c5f9eb wxWindow::wxWindow(wxWindow*, int, wxPoint const&, wxSize const&, long, wxString const&) + 1127
48 libwx_macud-2.8.0.dylib	0x16c6034d wxMacWindowEventHandler(OpaqueEventHandlerCallRef*, OpaqueEventRef*, void*) + 197
49 com.apple.HIToolbox	0x977d0c2f DispatchEventToHandlers(EventTargetRec*, OpaqueEventRef*, HandlerCallRec*) + 1567
50 com.apple.HIToolbox	0x977cfef6 SendEventToEventTargetInternal(OpaqueEventRef*, OpaqueEventTargetRef*, HandlerCallRec*) + 411
51 com.apple.HIToolbox	0x977f27f3 SendEventToEventTarget + 52
52 com.apple.HIToolbox	0x97841cce SendControlHit(HIView*, OpaqueEventRef*, short, unsigned long) + 296
53 com.apple.HIToolbox	0x97841b4f HIView::NotifyControlHit(OpaqueEventRef*, short, unsigned long) + 45
54 com.apple.HIToolbox	0x978a665f HIView::ClickInternal(CGPoint const&, unsigned long, void (*)(OpaqueControlRef*, short), OpaqueEventRef*, bool) + 245
55 com.apple.HIToolbox	0x978a7c18 HIView::ClickSelf(OpaqueEventRef*) + 368
56 com.apple.HIToolbox	0x977e3af9 HIView::EventHandler(OpaqueEventHandlerCallRef*, OpaqueEventRef*, void*) + 2363
57 com.apple.HIToolbox	0x977d0c2f DispatchEventToHandlers(EventTargetRec*, OpaqueEventRef*, HandlerCallRec*) + 1567
58 com.apple.HIToolbox	0x977cfef6 SendEventToEventTargetInternal(OpaqueEventRef*, OpaqueEventTargetRef*, HandlerCallRec*) + 411
59 com.apple.HIToolbox	0x977f27f3 SendEventToEventTarget + 52
60 com.apple.HIToolbox	0x97840b8e HIView::Click(OpaqueEventRef*) + 480
61 com.apple.HIToolbox	0x9784095b HandleClickAsHIView(OpaqueWindowPtr*, OpaqueEventRef*) + 151
62 com.apple.HIToolbox	0x9783f238 HandleWindowClick(OpaqueWindowPtr*, Point, short, unsigned long, OpaqueEventRef*) + 491
63 com.apple.HIToolbox	0x9783ed3b HandleMouseEvent(OpaqueEventHandlerCallRef*, OpaqueEventRef*) + 786
64 com.apple.HIToolbox	0x9783e652 StandardWindowEventHandler(OpaqueEventHandlerCallRef*, OpaqueEventRef*, void*) + 93
65 com.apple.HIToolbox	0x977d0c2f DispatchEventToHandlers(EventTargetRec*, OpaqueEventRef*, HandlerCallRec*) + 1567
66 com.apple.HIToolbox	0x977cfef6 SendEventToEventTargetInternal(OpaqueEventRef*, OpaqueEventTargetRef*, HandlerCallRec*) + 411
67 com.apple.HIToolbox	0x977f27f3 SendEventToEventTarget + 52
68 com.apple.HIToolbox	0x9780434f ToolboxEventDispatcherHandler(OpaqueEventHandlerCallRef*, OpaqueEventRef*, void*) + 1257
69 com.apple.HIToolbox	0x977d1080 DispatchEventToHandlers(EventTargetRec*, OpaqueEventRef*, HandlerCallRec*) + 2672
70 com.apple.HIToolbox	0x977cfef6 SendEventToEventTargetInternal(OpaqueEventRef*, OpaqueEventTargetRef*, HandlerCallRec*) + 411
71 com.apple.HIToolbox	0x977f27f3 SendEventToEventTarget + 52
72 libwx_macud-2.8.0.dylib	0x16beabee wxApp::MacHandleOneEvent(void*) + 34
73 libwx_macud-2.8.0.dylib	0x16beacb6 wxApp::MacDoOneEvent() + 120
74 libwx_macud-2.8.0.dylib	0x16c05232 wxEventLoop::Dispatch() + 32
75 libwx_macud-2.8.0.dylib	0x16cc12ed wxEventLoopManual::Run() + 97
76 libwx_macud-2.8.0.dylib	0x16c974a2 wxAppBase::MainLoop() + 76
77 _core_.so	0x169c28c4 wxPyApp::MainLoop() + 52
78 _core_.so	0x16a1003e wxIntersectRect(wxRect*, wxRect*) + 221628
79 org.python.python	0x032c54bb PyEval_EvalFrameEx + 21131
80 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
81 org.python.python	0x0323cc12 function_call + 162
82 org.python.python	0x0320a305 PyObject_Call + 85
83 org.python.python	0x0321cbf6 instancemethod_call + 422
84 org.python.python	0x0320a305 PyObject_Call + 85
85 org.python.python	0x032c3a06 PyEval_EvalFrameEx + 14294
86 org.python.python	0x032c6bce PyEval_EvalFrameEx + 27038
87 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
88 org.python.python	0x032c7587 PyEval_EvalCode + 87
89 org.python.python	0x032eba08 PyRun_FileExFlags + 168
90 org.python.python	0x032ba68e builtin_execfile + 398
91 org.python.python	0x032c5310 PyEval_EvalFrameEx + 20704
92 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
93 org.python.python	0x032c53a1 PyEval_EvalFrameEx + 20849
94 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
95 org.python.python	0x032c7587 PyEval_EvalCode + 87
96 org.python.python	0x032eba08 PyRun_FileExFlags + 168
97 org.python.python	0x032ec933 PyRun_SimpleFileExFlags + 867
98 org.python.python	0x032ecab8 PyRun_SimpleFile + 40
99 ...onmac.unspecified.CPAnalyst	0x0000572d start + 16353
100 ...onmac.unspecified.CPAnalyst	0x00005d8f main + 1551
101 ...onmac.unspecified.CPAnalyst	0x00001781 start + 53

Thread 1: Dispatch queue: com.apple.libdispatch-manager
0 libSystem.B.dylib	0x97f6b382 kevent + 10
1 libSystem.B.dylib	0x97f6ba9c _dispatch_mgr_invoke + 215
2 libSystem.B.dylib	0x97f6af59 _dispatch_queue_invoke + 163
3 libSystem.B.dylib	0x97f6acfe _dispatch_worker_thread2 + 240
4 libSystem.B.dylib	0x97f6a781 _pthread_wqthread + 390
5 libSystem.B.dylib	0x97f6a5c6 start_wqthread + 30

Thread 2:
0 libSystem.B.dylib	0x97f72aa2 __semwait_signal + 10
1 libSystem.B.dylib	0x97f7275e _pthread_cond_wait + 1191
2 libSystem.B.dylib	0x97f743f8 pthread_cond_wait$UNIX2003 + 73
3 org.python.python	0x0330241c PyThread_acquire_lock + 172
4 org.python.python	0x03307013 lock_PyThread_acquire_lock + 83
5 org.python.python	0x032c5310 PyEval_EvalFrameEx + 20704
6 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
7 org.python.python	0x032c53a1 PyEval_EvalFrameEx + 20849
8 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
9 org.python.python	0x032c53a1 PyEval_EvalFrameEx + 20849
10 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
11 org.python.python	0x0323cc12 function_call + 162
12 org.python.python	0x0320a305 PyObject_Call + 85
13 org.python.python	0x032c2c8b PyEval_EvalFrameEx + 10843
14 org.python.python	0x032c6bce PyEval_EvalFrameEx + 27038
15 org.python.python	0x032c6bce PyEval_EvalFrameEx + 27038
16 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
17 org.python.python	0x0323cc12 function_call + 162
18 org.python.python	0x0320a305 PyObject_Call + 85
19 org.python.python	0x0321cbf6 instancemethod_call + 422
20 org.python.python	0x0320a305 PyObject_Call + 85
21 org.python.python	0x032bf29e PyEval_CallObjectWithKeywords + 78
22 org.python.python	0x0330766c t_bootstrap + 76
23 libSystem.B.dylib	0x97f72259 _pthread_start + 345
24 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 3: Java: Exception Handler Thread
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libSystem.B.dylib	0x97fb0c78 mach_msg_server + 520
3 libjvm.dylib	0x1b3100eb jio_snprintf + 43803
4 libjvm.dylib	0x1b30ff80 jio_snprintf + 43440
5 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
6 libSystem.B.dylib	0x97f72259 _pthread_start + 345
7 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 4: Java: Gang worker#0 (Parallel GC Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b323cbe jio_vsnprintf + 333
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 5: Java: Gang worker#1 (Parallel GC Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b323cbe jio_vsnprintf + 333
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 6: Java: Gang worker#2 (Parallel GC Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b323cbe jio_vsnprintf + 333
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 7: Java: Gang worker#3 (Parallel GC Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b323cbe jio_vsnprintf + 333
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 8: Java: Gang worker#4 (Parallel GC Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b323cbe jio_vsnprintf + 333
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 9: Java: Gang worker#5 (Parallel GC Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b323cbe jio_vsnprintf + 333
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 10: Java: Gang worker#6 (Parallel GC Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b323cbe jio_vsnprintf + 333
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 11: Java: Gang worker#7 (Parallel GC Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b323cbe jio_vsnprintf + 333
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 12: Java: Gang worker#0 (Parallel CMS Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b5dda92 JVM_RaiseSignal + 739594
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 13: Java: Gang worker#1 (Parallel CMS Threads)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b5dda92 JVM_RaiseSignal + 739594
8 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
9 libSystem.B.dylib	0x97f72259 _pthread_start + 345
10 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 14: Java: Concurrent Mark-Sweep GC Thread
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b582599 JVM_RaiseSignal + 365585
3 libjvm.dylib	0x1b58293c JVM_RaiseSignal + 366516
4 libjvm.dylib	0x1b57669b JVM_RaiseSignal + 316691
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b3be0c9 JVM_Close + 13205
8 libjvm.dylib	0x1b3be031 JVM_Close + 13053
9 libjvm.dylib	0x1b329d73 jio_vsnprintf + 25090
10 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
11 libSystem.B.dylib	0x97f72259 _pthread_start + 345
12 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 15: Java: VM Thread
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b582599 JVM_RaiseSignal + 365585
3 libjvm.dylib	0x1b58293c JVM_RaiseSignal + 366516
4 libjvm.dylib	0x1b57669b JVM_RaiseSignal + 316691
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b390564 JVM_Lseek + 149378
8 libjvm.dylib	0x1b390214 JVM_Lseek + 148530
9 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
10 libSystem.B.dylib	0x97f72259 _pthread_start + 345
11 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 16: Java: Reference Handler
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b57e82c JVM_RaiseSignal + 349860
5 libjvm.dylib	0x1b5bdb5f JVM_RaiseSignal + 608727
6 libjvm.dylib	0x1b39d50a JVM_MonitorWait + 196
7 libjvmlinkage.dylib	0x1b176e75 JVM_MonitorWait + 69
8 ???	0x1c10b9d9 0 + 470858201
9 ???	0x1c103e31 0 + 470826545
10 ???	0x1c103e31 0 + 470826545
11 ???	0x1c101374 0 + 470815604
12 libjvm.dylib	0x1b3917aa JVM_Lseek + 154056
13 libjvm.dylib	0x1b391544 JVM_Lseek + 153442
14 libjvm.dylib	0x1b39d341 JVM_StartThread + 2726
15 libjvm.dylib	0x1b39d246 JVM_StartThread + 2475
16 libjvm.dylib	0x1b39d1d4 JVM_StartThread + 2361
17 libjvm.dylib	0x1b39d048 JVM_StartThread + 1965
18 libjvm.dylib	0x1b39cea7 JVM_StartThread + 1548
19 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
20 libSystem.B.dylib	0x97f72259 _pthread_start + 345
21 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 17: Java: Finalizer
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b57e82c JVM_RaiseSignal + 349860
5 libjvm.dylib	0x1b5bdb5f JVM_RaiseSignal + 608727
6 libjvm.dylib	0x1b39d50a JVM_MonitorWait + 196
7 libjvmlinkage.dylib	0x1b176e75 JVM_MonitorWait + 69
8 ???	0x1c10b9d9 0 + 470858201
9 ???	0x1c103e31 0 + 470826545
10 ???	0x1c103f97 0 + 470826903
11 ???	0x1c103f97 0 + 470826903
12 ???	0x1c101374 0 + 470815604
13 libjvm.dylib	0x1b3917aa JVM_Lseek + 154056
14 libjvm.dylib	0x1b391544 JVM_Lseek + 153442
15 libjvm.dylib	0x1b39d341 JVM_StartThread + 2726
16 libjvm.dylib	0x1b39d246 JVM_StartThread + 2475
17 libjvm.dylib	0x1b39d1d4 JVM_StartThread + 2361
18 libjvm.dylib	0x1b39d048 JVM_StartThread + 1965
19 libjvm.dylib	0x1b39cea7 JVM_StartThread + 1548
20 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
21 libSystem.B.dylib	0x97f72259 _pthread_start + 345
22 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 18: Java: Surrogate Locker Thread (Concurrent GC)
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30eba4 jio_snprintf + 38356
7 libjvm.dylib	0x1b3ad9d7 JVM_IsPrimitiveClass + 5991
8 libjvm.dylib	0x1b39d048 JVM_StartThread + 1965
9 libjvm.dylib	0x1b39cea7 JVM_StartThread + 1548
10 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
11 libSystem.B.dylib	0x97f72259 _pthread_start + 345
12 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 19: Java: Signal Dispatcher
0 libSystem.B.dylib	0x97f44b36 semaphore_wait_trap + 10
1 libjvm.dylib	0x1b3ae209 JVM_IsPrimitiveClass + 8089
2 libjvm.dylib	0x1b3adbf4 JVM_IsPrimitiveClass + 6532
3 libjvm.dylib	0x1b39d048 JVM_StartThread + 1965
4 libjvm.dylib	0x1b39cea7 JVM_StartThread + 1548
5 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
6 libSystem.B.dylib	0x97f72259 _pthread_start + 345
7 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 20: Java: C1 CompilerThread0
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30eba4 jio_snprintf + 38356
7 libjvm.dylib	0x1b3b4d30 JVM_Write + 288
8 libjvm.dylib	0x1b3af368 JVM_IsPrimitiveClass + 12536
9 libjvm.dylib	0x1b39d048 JVM_StartThread + 1965
10 libjvm.dylib	0x1b39cea7 JVM_StartThread + 1548
11 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
12 libSystem.B.dylib	0x97f72259 _pthread_start + 345
13 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 21: Java: Low Memory Detector
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b5824c9 JVM_RaiseSignal + 365377
3 libjvm.dylib	0x1b30f0e6 jio_snprintf + 39702
4 libjvm.dylib	0x1b576681 JVM_RaiseSignal + 316665
5 libjvm.dylib	0x1b576750 JVM_RaiseSignal + 316872
6 libjvm.dylib	0x1b30ec5d jio_snprintf + 38541
7 libjvm.dylib	0x1b3b0cf6 JVM_IsPrimitiveClass + 19078
8 libjvm.dylib	0x1b39d048 JVM_StartThread + 1965
9 libjvm.dylib	0x1b39cea7 JVM_StartThread + 1548
10 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
11 libSystem.B.dylib	0x97f72259 _pthread_start + 345
12 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 22: Java: VM Periodic Task Thread
0 libSystem.B.dylib	0x97f44afa mach_msg_trap + 10
1 libSystem.B.dylib	0x97f45267 mach_msg + 68
2 libjvm.dylib	0x1b582599 JVM_RaiseSignal + 365585
3 libjvm.dylib	0x1b582b2b JVM_RaiseSignal + 367011
4 libjvm.dylib	0x1b3b2dec JVM_IsPrimitiveClass + 27516
5 libjvm.dylib	0x1b30ed2d jio_snprintf + 38749
6 libSystem.B.dylib	0x97f72259 _pthread_start + 345
7 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 23: com.apple.CFSocket.private
0 libSystem.B.dylib	0x97f63ac6 select$DARWIN_EXTSN + 10
1 com.apple.CoreFoundation	0x95725c53 __CFSocketManager + 1091
2 libSystem.B.dylib	0x97f72259 _pthread_start + 345
3 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 24:
0 libSystem.B.dylib	0x97f72aa2 __semwait_signal + 10
1 libSystem.B.dylib	0x97f7275e _pthread_cond_wait + 1191
2 libSystem.B.dylib	0x97f743f8 pthread_cond_wait$UNIX2003 + 73
3 org.python.python	0x0330241c PyThread_acquire_lock + 172
4 org.python.python	0x03307013 lock_PyThread_acquire_lock + 83
5 org.python.python	0x032c5310 PyEval_EvalFrameEx + 20704
6 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
7 org.python.python	0x032c53a1 PyEval_EvalFrameEx + 20849
8 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
9 org.python.python	0x032c53a1 PyEval_EvalFrameEx + 20849
10 org.python.python	0x032c6bce PyEval_EvalFrameEx + 27038
11 org.python.python	0x032c73fa PyEval_EvalCodeEx + 2042
12 org.python.python	0x0323cc12 function_call + 162
13 org.python.python	0x0320a305 PyObject_Call + 85
14 org.python.python	0x0321cbf6 instancemethod_call + 422
15 org.python.python	0x0320a305 PyObject_Call + 85
16 org.python.python	0x032bf29e PyEval_CallObjectWithKeywords + 78
17 org.python.python	0x0330766c t_bootstrap + 76
18 libSystem.B.dylib	0x97f72259 _pthread_start + 345
19 libSystem.B.dylib	0x97f720de thread_start + 34

Thread 25:
0 libSystem.B.dylib	0x97f6a412 __workq_kernreturn + 10
1 libSystem.B.dylib	0x97f6a9a8 _pthread_wqthread + 941
2 libSystem.B.dylib	0x97f6a5c6 start_wqthread + 30

Thread 0 crashed with X86 Thread State (32-bit):
eax: 0x0000005b ebx: 0x032866d1 ecx: 0x00000001 edx: 0xc0000002
edi: 0x183aaa3c esi: 0x00000000 ebp: 0xbfff9aa8 esp: 0xbfff9a80
ss: 0x00000023 efl: 0x00010282 eip: 0x03286707 cs: 0x0000001b
ds: 0x00000023 es: 0x00000023 fs: 0x00000000 gs: 0x0000000f
cr2: 0x00000000

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0x13dfe000 - 0x13e07ff7 +fftpack_lite.so ??? (???) /Applications/CPAnalyst.app/Contents/Resources/lib/python2.7/numpy/fft/fftpack_lite.so
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0x923d8000 - 0x92428ff7 com.apple.framework.familycontrols 2.0.2 (2020) <596ADD85-79F5-A613-537B-F83B6E19013C> /System/Library/PrivateFrameworks/FamilyControls.framework/Versions/A/FamilyControls
0x92429000 - 0x9242aff7 com.apple.TrustEvaluationAgent 1.1 (1) <2D970A9B-77E8-EDC0-BEC6-7580D78B2843> /System/Library/PrivateFrameworks/TrustEvaluationAgent.framework/Versions/A/TrustEvaluationAgent
0x92464000 - 0x92466ff7 com.apple.securityhi 4.0 (36638) <6118C361-61E7-B34E-93DB-1B88108F8F18> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI
0x92467000 - 0x92905ff7 com.apple.RawCamera.bundle 3.9.0 (584) <5CC4C59B-5ECF-9767-2BB1-493AB505F433> /System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera
0x92975000 - 0x92978fe7 libmathCommon.A.dylib 315.0.0 (compatibility 1.0.0) <1622A54F-1A98-2CBE-B6A4-2122981A500E> /usr/lib/system/libmathCommon.A.dylib
0x92979000 - 0x9299dff7 libJPEG.dylib ??? (???) /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libJPEG.dylib
0x9299e000 - 0x929a6ff7 com.apple.DisplayServicesFW 2.3.3 (289) <828084B0-9197-14DD-F66A-D634250A212E> /System/Library/PrivateFrameworks/DisplayServices.framework/Versions/A/DisplayServices
0x92a94000 - 0x92adaff7 libauto.dylib ??? (???) <29422A70-87CF-10E2-CE59-FEE1234CFAAE> /usr/lib/libauto.dylib
0x92adb000 - 0x92bddfef com.apple.MeshKitIO 1.1 (49.2) /System/Library/PrivateFrameworks/MeshKit.framework/Versions/A/Frameworks/MeshKitIO.framework/Versions/A/MeshKitIO
0x92dbb000 - 0x92de1ffb com.apple.DictionaryServices 1.1.2 (1.1.2) <43E1D565-6E01-3681-F2E5-72AE4C3A097A> /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/DictionaryServices.framework/Versions/A/DictionaryServices
0x93d38000 - 0x93d38ff7 com.apple.Cocoa 6.6 (???) <5A785062-1ABB-2A54-BAAC-8FEF95275E05> /System/Library/Frameworks/Cocoa.framework/Versions/A/Cocoa
0x93d39000 - 0x93d39ff7 com.apple.quartzframework 1.5 (1.5) <7DD4EBF1-60C4-9329-08EF-6E59731D9430> /System/Library/Frameworks/Quartz.framework/Versions/A/Quartz
0x93d3a000 - 0x93db4fff com.apple.audio.CoreAudio 3.2.6 (3.2.6) <156A532C-0B60-55B0-EE27-D02B82AA6217> /System/Library/Frameworks/CoreAudio.framework/Versions/A/CoreAudio
0x93db5000 - 0x93e0bff7 com.apple.MeshKitRuntime 1.1 (49.2) /System/Library/PrivateFrameworks/MeshKit.framework/Versions/A/Frameworks/MeshKitRuntime.framework/Versions/A/MeshKitRuntime
0x93e0c000 - 0x93e0dff7 com.apple.audio.units.AudioUnit 1.6.7 (1.6.7) <838E1760-F7D9-3239-B3A8-20E25EFD1379> /System/Library/Frameworks/AudioUnit.framework/Versions/A/AudioUnit
0x93e0e000 - 0x93e26ff7 com.apple.CFOpenDirectory 10.6 (10.6) /System/Library/Frameworks/OpenDirectory.framework/Versions/A/Frameworks/CFOpenDirectory.framework/Versions/A/CFOpenDirectory
0x93e27000 - 0x93f36fe7 com.apple.WebKit 6533.21 (6533.21.1) <87AFEE12-270F-2D84-1B93-81DF1DA47A7F> /System/Library/Frameworks/WebKit.framework/Versions/A/WebKit
0x93f37000 - 0x93f49ff7 com.apple.MultitouchSupport.framework 207.11 (207.11) <6FF4F2